Levels: Primary, Middle, High, Other
| Name | Level |
|---|---|
| East Juniata El Sch | Elementary |
| East Juniata Jshs | High |
| Fayette Twp El Sch | Elementary |
| Fermanagh-Mifflintown El Sch | Elementary |
| Juniata El Sch | Elementary |
| Juniata Shs | High |
| Lack-Tuscarora El Sch | Elementary |
| Monroe Twp El Sch | Elementary |
| Mountain View El Sch | Elementary |
| Thompsontown-Delaware El Sch | Elementary |
| Tuscarora Ms | Middle |
| Tuscarora Valley El Sch | Elementary |
| Walker Twp El Sch | Elementary |
Levels: Primary, Middle, High, Other
Levels: Elementary School, Secondary School, Other - mixed grades
| Name | Level |
|---|---|
| Black Rock School | Elementary |
| Breezy Hollow Amish School | Elementary |
| Cedar Springs Parochial School | Elementary |
| Cedar View School | Elementary |
| East Salem Amish Parochial School | Elementary |
| East Salem School | Elementary |
| Goodwill Mennonite School | Mixed Grades |
| Juniata Mennonite School | Mixed Grades |
| Kurtz Valley School | Mixed Grades |
| Laurel Run School | Elementary |
| Mountain View Amish School | Elementary |
| Red Rock School | Elementary |
| Ridgeside School | Elementary |
| Ridgeside School | Elementary |
| Shade Mountain Christian School | Mixed Grades |
| Shade Mountain School | Elementary |
| Windy Acres School | Elementary |
Levels: Elementary School, Secondary School, Other - mixed grades
